Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913922.1_cds_XP_016463931.1_57007
CDS Infomation

[gene=LOC107786929] [db_xref=GeneID:107786929] [protein=rho GTPase-activating protein 5-like] [protein_id=XP_016463931.1] [location=join(37101..37510,40850..40970,41120..41239,43455..43685,44326..44901)] [gbkey=CDS]
Sequence

ATGACAGAGGTCCTCCACTCCTCTTCTCCTTCCTCTTCTTCTCCTTCAATATCTACACCT
ACACACAATGGCCACACATTGTTTGTAGAAGAAGAAATTGAGAGGGGTTCTGAGGTTGCT
GTTTGTGATTCTGAGGAAGAAATAGAGGAGAAAAAGAGAGATAAAGAAAGAAGAGATCAT
TTGTCTTTATTAGCTCTTTTAGTGACATTGTTTAGGAAGAGTTTTTGGATGGCTTGTAAG
ACAGATAGGGAAGGAGGAGGAGATCTGTGTGGTGGTAGTAGGGGTATGGAAATTGGGTGG
CCTACTAATGTGCGCCATGTTGCGCATGTTACCTTTGATAGGTTCAATGGATTCTTGGGT
CTTCCTGTTGAATTTGAGCCTGAAGTTTCCAGAAGAGCCCCCAGTGCTAGTACCACTGTA
TTTGGAGTGTCAACGGAGTCCATGCAGTTATCATTCGACTCTCGTGGGAATAGCGTTCCA
ACTATTCTCCTTCTAATGCAAAGGCGTTTGTATGCTCAAGGGGGTTTACAGGCAGAAGGG
ATTTTCAGAATAAATGCTGAAAACAGCGAGGAGGAGCTTGTTAGAGAGCAATTAAACAGG
GGAATAGTTCCGGATGGGATTGATGTACATTGTTTGGCAGGCCTCATTAAGGCTTGGTTC
AGGGAGCTGCCAAGTGGGGTGTTGGATACACTTTCTCCCGAGCAGGTCATGCAATGCCAA
TTAGAAGAGGACAGCATTGCACTCGTGAGACTTCTGCCACCAACAGAAGCTGCTCTGCTG
GACTGGGCTATCAATCTCATGGCTGATGTTGTCCAGGAAGAACACCTTAACAAGATGAAT
ACGCGCAACATCGCAATGGTGTTTGCTCCTAACATGACACAGATGGCAGATCCGTTGACT
GCACTGATGTATGCTGTCCAAGTAATGAATTTCTTGAGGACGCTCATCGAAAGGACCTTA
AAAGAAAGAGAAGATTCCCTGATTGAACCAGCTTCTGTTTCTAACCTAGGCCGACCTGAT
GAGAATGGTCGTCAAAGTCCACCGCAACTATCTCTGGAGAGCACCAATGAATCAGATGAA
CCGACTGAGCAGGTGTATACTGTAGAAGAGCCCGATTCAGCCAGGGTATCTGAATCTAAT
CGAGTAGATAACAACACTGATGATGAATATCTTAGTTATACAACTTCTTCAGAGGAATCC
GACGATAGTGTATCTTGTGGAACTCCTATCCATGTTGATACCATGGCAAGAGAAGCCTGT
ATGACAAAAGGTCCAAACTTTGAAGAGGACGCTCAAAGGATAGGCCAGTCAAGTGATTCT
AATCAGACGAAGGATGTTCTGAAAATTGATTTAGAGCCAACTACAGTTCAGTCTCTGGGA
AATGATAGTAAATCTAAAGGAATAAGCAACTTGAGTCGTATAAATTCAATGACAGAGCGG
ACAGAAGCCTGGCGGTAA

Peptide Sequence

PEP ID

XP_016463931.1
PEP Infomation

PREDICTED: rho GTPase-activating protein 5-like [Nicotiana tabacum]
Sequence

MTEVLHSSSPSSSSPSISTPTHNGHTLFVEEEIERGSEVAVCDSEEEIEEKKRDKERRDH
LSLLALLVTLFRKSFWMACKTDREGGGDLCGGSRGMEIGWPTNVRHVAHVTFDRFNGFLG
LPVEFEPEVSRRAPSASTTVFGVSTESMQLSFDSRGNSVPTILLLMQRRLYAQGGLQAEG
IFRINAENSEEELVREQLNRGIVPDGIDVHCLAGLIKAWFRELPSGVLDTLSPEQVMQCQ
LEEDSIALVRLLPPTEAALLDWAINLMADVVQEEHLNKMNTRNIAMVFAPNMTQMADPLT
ALMYAVQVMNFLRTLIERTLKEREDSLIEPASVSNLGRPDENGRQSPPQLSLESTNESDE
PTEQVYTVEEPDSARVSESNRVDNNTDDEYLSYTTSSEESDDSVSCGTPIHVDTMAREAC
MTKGPNFEEDAQRIGQSSDSNQTKDVLKIDLEPTTVQSLGNDSKSKGISNLSRINSMTER
TEAWR

Transcript Sequence

Gene sequence data has not been registered.